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Isolation of the 3β-HSD promoter from Digitalis ferruginea subsp. ferruginea and its functional characterization in Arabidopsis thaliana

dc.contributor.authorAslam, Noreen
dc.contributor.authorSameeullah, Muhammad
dc.contributor.authorYildirim, Muhammet
dc.contributor.authorBaloglu, Mehmet Cengiz
dc.contributor.authorYucesan, Buhara
dc.contributor.authorLössl, Andreas G
dc.contributor.authorWaheed, Mohammad Tahir
dc.contributor.authorGurel, Ekrem
dc.date.accessioned2026-01-04T16:55:56Z
dc.date.issued2022-06-22
dc.description.abstractAlthough members of the SDR gene family (short chain dehydrogenase) are distributed in kingdom of life, they have diverse roles in stress tolerance mechanism or secondary metabolite biosynthesis. Nevertheless, their precise roles in gene expression or regulation under stress are yet to be understood.As a case study, we isolated, sequenced and functionally characterized the 3β-HSD promoter from Digitalis ferruginea subsp. ferruginea in Arabidopsis thaliana.The promoter fragment contained light and stress response elements such as Box-4, G-Box, TCT-motif, LAMP element, ABRE, ARE, WUN-motif, MYB, MYC, W box, STRE and Box S. The functional analysis of the 3β-HSD promoter in transgenic Arabidopsis seedlings showed that the promoter was expressed in cotyledon and root elongation zone in 2 days' seedlings. However, this expression was extended to hypocotyl and complete root in 6 days' seedlings. In 20 days-old seedlings, promoter expression was distributed to the whole seedling including hydathodes aperture, vascular bundle, shoot apical meristem, trichomes, midrib, leaf primordia, hypocotyl and xylem tissues. Further, expression of the promoter was enhanced or remained stable under the different abiotic stress conditions like osmotic, heat, cold, cadmium or low pH. In addition, the promoter also showed response to methyl jasmonate (MeJA) application. The expression could not be induced in wounded cotyledon most likely due to lack of interacting elements in the promoter fragment.Taken together, the 3β-HSD promoter could be a candidate for the development of transgenic plants especially under changing environmental conditions.
dc.description.urihttps://doi.org/10.1007/s11033-022-07634-4
dc.description.urihttps://pubmed.ncbi.nlm.nih.gov/35733064
dc.description.urihttps://hdl.handle.net/20.500.12491/11521
dc.identifier.doi10.1007/s11033-022-07634-4
dc.identifier.eissn1573-4978
dc.identifier.endpage7183
dc.identifier.issn0301-4851
dc.identifier.openairedoi_dedup___::3bf1f69f1f3c136c3511584d789bc328
dc.identifier.orcid0000-0001-6767-2539
dc.identifier.orcid0000-0001-7054-1169
dc.identifier.orcid0000-0002-9861-462x
dc.identifier.pubmed35733064
dc.identifier.scopus2-s2.0-85132730999
dc.identifier.startpage7173
dc.identifier.urihttps://hdl.handle.net/20.500.12597/39780
dc.identifier.volume49
dc.identifier.wos000814480600014
dc.language.isoeng
dc.publisherSpringer Science and Business Media LLC
dc.relation.ispartofMolecular Biology Reports
dc.rightsOPEN
dc.subjectPlant-Growth
dc.subjectDigitalis
dc.subjectArabidopsis Proteins
dc.subjectFunctional Characterization
dc.subjectMeristem
dc.subjectArabidopsis
dc.subjectPlants, Genetically Modified
dc.subjectGene Promoter
dc.subjectBeta-HSD Promoter
dc.subjectGene Expression Regulation, Plant
dc.subjectSeedlings
dc.subjectCallus-Cultures
dc.subjectSDR
dc.titleIsolation of the 3β-HSD promoter from Digitalis ferruginea subsp. ferruginea and its functional characterization in Arabidopsis thaliana
dc.typeArticle
dspace.entity.typePublication
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Nevertheless, their precise roles in gene expression or regulation under stress are yet to be understood.As a case study, we isolated, sequenced and functionally characterized the 3β-HSD promoter from Digitalis ferruginea subsp. ferruginea in Arabidopsis thaliana.The promoter fragment contained light and stress response elements such as Box-4, G-Box, TCT-motif, LAMP element, ABRE, ARE, WUN-motif, MYB, MYC, W box, STRE and Box S. The functional analysis of the 3β-HSD promoter in transgenic Arabidopsis seedlings showed that the promoter was expressed in cotyledon and root elongation zone in 2 days' seedlings. However, this expression was extended to hypocotyl and complete root in 6 days' seedlings. In 20 days-old seedlings, promoter expression was distributed to the whole seedling including hydathodes aperture, vascular bundle, shoot apical meristem, trichomes, midrib, leaf primordia, hypocotyl and xylem tissues. Further, expression of the promoter was enhanced or remained stable under the different abiotic stress conditions like osmotic, heat, cold, cadmium or low pH. In addition, the promoter also showed response to methyl jasmonate (MeJA) application. 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